API¶
demuxEM can also be used as a python package. Import demuxEM by:
import demuxEM
Demultiplexing¶
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For cell-hashing data, estimate antibody background probability using KMeans algorithm. |
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Demultiplexing cell/nucleus-hashing data, using the estimated antibody background probability calculated in |
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Write demultiplexing results into raw gene expression matrix. |